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[[FrontPage]] This page contains all of the codes, scripts, and data which are used to obtain the final catalog of strong line emitters. - [[Step 0: Basic Data and Catalog>TransferFromMARK#Step0]] - [[Step 1: Selection of Strong Line Emitter Candidates>TransferFromMARK#Step1]] - [[Step 2: Determination of z_ph and Identification of Emission Line>TransferFromMARK#Step2]] - [[Step 3: Selection of Strong Line Emitters and Calculation of Physical Quantities>TransferFromMARK#Step3]] - [[Step 4: Classifying AGN Candidates>TransferFromMARK#Step4]] * &aname(AllInOne){All in one script}; [#j3ec7d99] - &ref(SelectIAexcessObjects_All.sh); -- see this script first and then one can find the codes, scripts, and data files which are required to obtain the final catalogs of strong line emitters * &aname(Step0){Step 0: Basic Data and Catalog}; [#ibef7bb3] - cosmos_phot_20120626bs.tbl: the latest version of i-band selected photometric catalog including the UltraVISTA DR1 data -- it has too huge file size (~11 GB) to be uploaded here -- it can be downloaded from the COSMOS internal page -- [note] the file we used in the following Step 1 are slightly modified from the original photometric catalog in the following two points by using &ref(DoPhotcat20.sh);: --- removing the header and the 1st column which shows the object name --- sorting the IDs in ascending order - photoz_zml_vers2.0_010312-fulls.out: the latest version of photo-z catalog -- it has also too huge file size (~1.5 GB) to be uploaded here -- it can be downloaded from the COSMOS internal page -- [note] the file we used in the following Step 1 are also slightly modified from the original photo-z catalog in the following one point by using &ref(photoz_vers2.0_sort.sh);: --- sort the IDs in ascending order - &ref(NewMasking.reg);: (RA,DEC) of the masked-out regions - &ref(Chandra_MatchedCatalog.dat);: ID, (RA,DEC), and X-ray fluxes of the cross-matched IA-excess candidates -- cross-matching condition: angular distance is smaller than or equals to 1 arcsec - &ref(XMM_MatchedCatalog.dat);: ID, (RA,DEC), and X-ray fluxes of the cross-matched IA-excess candidates -- cross-matching condition: angular distance is smaller than or equals to the positional error for the object in the XMM-Newton source catalog - &ref(VLA_MatchedCatalog.dat);: ID, (RA,DEC), and X-ray fluxes of the cross-matched IA-excess candidates -- cross-matching condition: angular distance is smaller than or equals to 1 arcsec - code (F90) and script to make the above 2 cross-matched catalogs (i.e., XMM and VLA): &ref(Step0_CrossMatching.f90);, &ref(Step0_CrossMatching.sh); -- input files: &ref(cosmos_xmm_200811_v2.tbl);, &ref(vla-cosmos_lp_sources_v2_20080615.tbl); * &aname(Step1){Step 1: Selection of Strong Line Emitter Candidates}; [#t82f3c4b] - code (F90) and scripts to select strong line emitter candidates: &ref(Step1.f90);, &ref(Step1.sh); -- sub code to separate the candidates into groups (F90): &ref(Step1_makeGroup.f90); - catalog of the 6,164 Step 1 selected line emitter candidates: &ref(Step1.dat); - table of the 6,164 Step 1 selected line emitter candidates: &ref(table_Step1.txt); -- this table is extracted from one of the output file of Step1.sh, &ref(IdonBand.dat);, by using the awk script, &ref(count_Step1_IdonBand.awk); * &aname(Step2){Step 2: Determination of z_ph and Identification of Emission Line}; [#ra1924eb] - code (F90) and scripts to determine z_ph and identify emission line: &ref(Step2_zph.f90);, &ref(Step2.sh); - catalogs of the 6,140 Step 2 selected line emitter candidates: &ref(Step2.dat); - table of the 6,140 Step 2 selected line emitter candidates: &ref(table_Step2.txt); -- this table is extracted from &ref(Step2.dat); by using the awk script, &ref(count_Step2.awk); - catalog of the 1,052 LAE candidates (included in &ref(Step2.dat);): &ref(Step2_LAE_all.dat); -- + Step 3 SED-fitting results: &ref(Step3_LAE_all.dat); -- this LAE candidate catalog is extracted from &ref(Step2.dat); by using the script of &ref(make_LAE_catalog_Step2.sh); as follows: --- &ref(make_LAE_catalog_Step2.awk); + &ref(Step2.dat); --> &ref(Step2_LAE_all.dat);, &ref(Step2_LAE_single.dat);, &ref(Step2_LAE_double.dat);, &ref(Step2_LAE_triple.dat); --- &ref(make_zph_list.awk); + &ref(Step2_LAE_all.dat); --> &ref(zph_list_LAE_all.txt); --- &ref(extract_ID.awk); + &ref(Step2_LAE_all.dat); --> &ref(list_LAE_all.txt); --- &ref(count_LAE_Step2.awk); + &ref(Step2_LAE_all.dat); --> &ref(table_Step2_LAE_all.txt); --- &ref(remove_LAEcand.awk); + &ref(Step2.dat); --> &ref(Step2_woLAE.dat); - catalog of the 4,734 low-z emitter candidates (included in &ref(Step2.dat);): &ref(Step2_lowz_all.dat); -- + Step 3 SED-fitting results: &ref(Step3_lowz_all.dat); -- this low-z emitter candidate catalog is extracted from &ref(Step2_woLAE.dat); by using the script of &ref(make_lowz_catalog_Step2.sh); as follows: --- &ref(make_lowz_catalog_Step2.awk); + &ref(Step2_woLAE.dat); --> &ref(Step2_lowz_all.dat);, &ref(Step2_lowz_single.dat);, &ref(Step2_lowz_double.dat);, &ref(Step2_lowz_triple.dat); --- &ref(make_zph_list.awk); + &ref(Step2_lowz_all.dat); --> &ref(zph_list_lowz_all.txt); - catalog of the 354 others (included in &ref(Step2.dat);): &ref(Step2_others.dat); -- + Step 3 SED-fitting results: &ref(Step3_others.dat); -- this other emitter candidate catalog is extracted from &ref(Step2_woLAE.dat); by using the awk script of &ref(make_others_catalog_Step2.awk); --- &ref(make_zph_list.awk); + &ref(Step2_others.dat); --> &ref(zph_list_others.txt); - code (F90) and script to write the observed SED of the line emitter candidates selected in Step 2: &ref(Step2_writeSED.f90);, &ref(Step2_writeSED.sh); -- the output files are the followings: &ref(obsSED_LAE.tar.gz);, &ref(obsSED_lowz.tar.gz);, &ref(obsSED_others.tar.gz); --- the format of these output files are found from &ref(obsSED_ID1000100.dat);, which is included in &ref(obsSED_LAE.tar.gz); * &aname(Step3){Step 3: Selection of Strong Line Emitters and Calculation of Physical Quantities}; [#j45f236a] - SED fitting code (F90): &ref(Step3_SEDfit.f90); -- input files: &ref(zph_list_LAE_all.txt);, &ref(zph_list_lowz_all.txt);, &ref(zph_list_others.txt);, and the SED templates (see below) -- scripts: &ref(Step3_SEDfit_LAE.sh);, &ref(Step3_SEDfit_lowz.sh);, &ref(Step3_SEDfit_others.sh); - the SED templates: -- the SED templates have so huge file size (~ 1.5 GB at a certain redshift) that they cannot be uploaded here -- the SED templates are uploaded on newngli: --- /net/newngli/data/kobayashi/SEDtemplates/{LAE,lowz,others}/SEDtemp_z*p***_{young,old}.dat: time evolution of fnu for 37 broadbands --- /net/newngli/data/kobayashi/SEDtemplates/Mstar+Lnu_{young,old}.dat: time evolution of Mstar, SFR, L1350, L1500, and L2um -- their format is the following: &ref(format_SEDtemp.txt); - the code making the SED templates (F90): &ref(Step3_makeSEDtemplate.f90); -- [note] because making the SED templates is highly time-consuming, the SED templates were made separately by using several computers -- input files: &ref(inputfile_makeSEDtemplate.tar.gz); (e.g.) &ref(makeSEDtemplate_LAE1.in); -- scripts: &ref(scripts_Step3_makeSEDtemplate.tar.gz); (e.g.) &ref(Step3_makeSEDtemplate_LAE1.sh); -- the above input files and scripts were created by the following code, script, and input files: --- code (F90): &ref(makescripts.f90); --- script: &ref(makescripts.sh); --- input files: &ref(makeSEDtemplate_LAE);, &ref(makeSEDtemplate_nonLAE);, &ref(makeSEDtemplate_others); - catalogs of the Step3 selected 770 LAE candidates: &ref(Step3_LAE_all_final.dat); -- this catalog is extracted from the catalog of 1,052 Step2 selected LAE candidates (&ref(Step3_LAE_all.dat);) by using the script of &ref(step3_LAE.sh); as follows: +++ &ref(extract_Nundet5.awk); + &ref(Step3_LAE_all.dat); --> &ref(Step3_LAE_all_Nundet5.dat);, &ref(tab-Step3_LAE_all_Nundet5.dat); +++ &ref(extract_chinu2lteq3.awk); + &ref(Step3_LAE_all_Nundet5.dat); --> &ref(Step3_LAE_all_Nundet5+chinu2lteq3.dat);, &ref(tab-Step3_LAE_all_Nundet5+chinu2lteq3.dat); +++ &ref(extract_step3_final.awk); + &ref(Step3_LAE_all_Nundet5+chinu2lteq3.dat); --> &ref(Step3_LAE_all_final.dat);, &ref(tab-Step3_LAE_all_final.dat); --- the above script also creates several temporal intermediate catalogs as follows: intermed/Step3_LAE_{Nundet5,Nundet5+chinu2lteq3,final}_IA***.dat - code (F90) and script to write the best-fit SED of the line emitters selected in Step 3: &ref(Step3_writeSED.f90);, &ref(Step3_writeSED.sh); -- the output files are the followings: &ref(bestSED_LAE.tar.gz);, &ref(bestSED_lowz1.tar.gz);, &ref(bestSED_lowz2.tar.gz);, &ref(bestSED_lowz3.tar.gz);, &ref(bestSED_lowz4.tar.gz);, &ref(bestSED_others.tar.gz); --- the format of these output files are found from &ref(bestSED_ID1000100.dat);, which is included in &ref(bestSED_LAE.tar.gz); -- gnuplot scripts to plot these SEDs: &ref(plot-SED_Step3_LAE.gpl);, &ref(plot-SED_Step3_lowz.gpl);, &ref(plot-SED_Step3_others.gpl); --- these gnuplot scripts are automatically made by running the above script of &ref(Step3_writeSED.sh); * &aname(Step4){Step 4: Classifying AGN Candidates}; [#ud4705b1] - catalog of the 35 LAE candidates classified as AGN: &ref(Step4_LAE_AGN_all.dat); -- these are sub-classified into the followings: --- 20 satisfying the IRAC-color criteria: &ref(Step4_LAE_AGN_IRAC_all.dat); --- 17 Chandra detected: &ref(Step4_LAE_AGN_Chandra_all.dat); --- 2 XMM-Newton detected: &ref(Step4_LAE_AGN_XMM_all.dat); --- 3 VLA detected: &ref(Step4_LAE_AGN_VLA_all.dat); -- sorted catalogs of the 35 LAE candidates classified as AGN: --- z_ph in ascending order: &ref(Step4_LAE_AGN_all_zph.dat); --- EW0 in descending order: &ref(Step4_LAE_AGN_all_EW0.dat); --- Mstar in descending order: &ref(Step4_LAE_AGN_all_Mstar.dat); - catalog of the 735 star-forming LAE candidates: &ref(Step4_LAE_nonAGN_all.dat); -- sorted catalogs of the 735 star-forming LAE candidates: --- z_ph in ascending order: &ref(Step4_LAE_nonAGN_all_zph.dat); --- EW0 in descending order: &ref(Step4_LAE_nonAGN_all_EW0.dat); --- Mstar in descending order: &ref(Step4_LAE_nonAGN_all_Mstar.dat); - catalog of the 52 star-forming LAE candidates w/ EW0(Lya) >= 100 A: &ref(Step4_LAE_nonAGN_sLAE_all.dat); -- sorted catalog of the 52 star-forming LAE candidates w/ EW0(Lya) >= 100 A: --- Mstar in descending order: &ref(Step4_LAE_nonAGN_sLAE_all_Mstar.dat); - the above catalogs are extracted by using the script of &ref(step4_LAE.sh); as follows: ++ &ref(extract_Step4.awk); + temporal catalog of Step 3 selected LAE candidates of intermed/Step3_LAE_final_IA***.dat (created by &ref(step3_LAE.sh);) --> temporal catalog of AGN/star-forming LAE candidates ++ &ref(merge_id.awk); + temporal catalog of AGN/star-forming LAE candidates --> &ref(Step4_LAE_AGN_all.dat);/&ref(Step4_LAE_nonAGN_all.dat);, &ref(Step4_LAE_nonAGN_sLAE_all.dat); - code (F90) to write the best-fit SED of the LAE candidates selected in Step 4: &ref(Step4_writeSED.f90); -- the output files are the followings: &ref(bestSED_LAE_Step4.tar.gz); --- the format of these output files are found from &ref(bestSED_Step4_ID67378.dat);, which is included in &ref(bestSED_LAE_Step4.tar.gz); -- gnuplot script to plot these SEDs: &ref(plot-SED_LAE_nonAGN_sLAE_all_Mstar.gpl); --- this gnuplot script is automatically made by running the above code of &ref(Step4_writeSED.f90); [[FrontPage]]
